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Remote Desktop BIU VM 2
Main use: General General use virtual workstation mostly for image processing and analysisBIU internal testing and running scripts.
Total system failure 27.3.2023, system reinstalled from scratch
Software:
- Huygens Professional by Scientific Volume Imaging, 3D and 4D data deconvolution with confocal, wide-field and time modules; data visualization and analysis.
- Huygens Localizer
- Imaris Viewer
- Fiji/ImageJ, image processing and analysisICY, image processing and analysis (good for big data)QuPath 0.2.3, for digital pathology and whole slide image analysis
- Zen by Carl Zeiss Microscopy (blue lite)
- Leica Application Suite X (LAS X) by Leica Microsystem
- NIS Viewer by Nikon
- Matlab by MathWorks
- Ilastik, image processing software mainly for classification and segmentation.
- CellProfiler, image processing and analysis
- Anaconda
- R and R studio, statistical analysis
- CTvox, uCT analysisOlympus OlyVIA freeware