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You may be considering procuring computational resources, wether whether they are GPU machines for Deep Learning, regular servers for computing, servers for heavy duty database use, or storage capacity and have checked that your requirement is something we do not yet offer. We have a good news. We can house servers that are used for computational tasks and incorporate them gladly to the existing pool of resources. These can be for example:
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You can always opt to increase the common pool of resources at any time. Even ones that have been dedicated before.
(Regardless of whether the server would be added into the cluster environment or remain a standalone machine, any purchases must be done through University's purchase contracts to ensure that legal aspects such as formal bidding contest are fulfilled properly.)
1.1.1 We offer benefits
- Standard, centrally managed Centos7 Linux environment.
- All the software modules listed later in this document.
- Very high throughput/low latency I/O ($WRKDIR).
- Automated data migration from $WRKDIR to CEPH data lake - Planned 2019Q2.
- Other resources in a same high-bandwidth interconnect fabric.
- Resource Usage statistics.
- You can utilize our procurement process and therefore get better deals.
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Name | Where Available | How to Access | Tutorials & Use Cases |
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AOCC | Turso | As a module in clusters. | AMD Compiler Suite |
TensorFlow | Turso | Through Python Virtualenv | |
Keras | Turso | Through Python Virtualenv | |
CUDA | Turso, Cubbli | As a module in clusters. Cubbli default | |
CudNN | Turso | As a module in clusters. | |
AMBER | Turso | As a module in clusters. | Molecular simulation toolkit |
GROMACS | Turso | As a module in clusters. | G romacs tutorials, GROMACS/2018.3-fosscuda-2018b with GPU support. |
OpenBLAS | Turso | As a module in clusters. | |
OpenMPI | Turso | As a module in clusters. | |
OpenFOAM | Turso | As a module in clusters. | Tutorial |
Python | Turso | As a module in clusters. | |
GCC | Turso, Cubbli | As a module in clusters. Cubbli default | GNU Compiler Collection |
Java | Turso, Cubbli | As a module in clusters. Cubbli default | |
Bison | Turso | As a module in clusters. | |
Dalton | Turso | As a module in clusters. | |
MVAPICH | Turso | As a module in clusters. | |
Molden | Turso | As a module in clusters. | Molecular Structure Analysis |
ORCA | Turso | As a module in clusters. | Quantum Chemistry |
Perl | Turso, Cubbli | As a module in clusters. Cubbli default | |
ScaLAPACK | Turso | As a module in clusters. | |
GMP | Turso | As a module in clusters. | |
NASM | Turso | As a module in clusters. | |
Mesa | Turso | As a module in clusters. | |
Mako | Turso | As a module in clusters. | |
R | Turso | As a module in clusters. | |
R-Studio | Cubbli | Cubbli default | |
GNU Octave | Cubbli | Cubbli default | |
FreeSurfer | Cubbli | Software Distribution | MRI Imaging |
NoMachine client | Cubbli | Software Distribution | |
VMD | Cubbli | Software Distribution | Molecular Dynamics |
PCRE | Turso | As a module in clusters. | |
OpenPGM | Turso | As a module in clusters. | |
PyZMQ | Turso | As a module in clusters. | |
IPython | Turso | As a module in clusters. | Jupyter Notebook |
ZeroMQ | Turso | As a module in clusters. | |
XZ | Turso | As a module in clusters. | |
Valgrind | Turso | System Package | Small tutorial |
Valgrind-openmpi | Turso | System Package | Resources for OpenMPI debugging |
v8 | Turso | System Package | v8 Development Library |
LLVM | Turso | As a module in clusters. | |
NLopt | Turso | As a module in clusters. | |
M4 | Turso | As a module in clusters. | |
GDAL | Turso | As a module in clusters. | Geospatial Data Abstraction Library |
HDF5 | Turso | As a module in clusters. | |
H5py | Turso | As a module in clusters. | |
FFTW | Turso | As a module in clusters. | C subroutine library for discrete Fourier transform |
Spark | Turso | As a module in clusters. | |
Fortran | Turso | As a module in clusters. | |
Julia | Cubbli | Cubbli default | |
Haskell | Cubbli | Cubbli default | |
Oracle JDK | Cubbli | Cubbli default | |
Tcl/tk | Turso | As a module in clusters. | |
SHRiMP | Turso | As a module in clusters. | |
GPAW | Turso | As a module in clusters. | |
BLAST+ | Turso | As a module in clusters. | |
ASE | Turso | As a module in clusters. | |
LAMMPS | Turso | As a module in clusters. | |
Geant4 | Turso | As a module in clusters. | |
SQLite | Turso | As a module in clusters. | |
NumPy | Turso | As a module in clusters. | Julia vs. Python performance |
Scilab | Cubbli? | Software Distribution | Commercial? |
Cernlib | Cubbli ? | Software Distribution | |
GSL | Cubbli ?, Mutteri, Turso | Software Distribution | |
SLATEC | Cubbli ? | Software Distribution | Commercial? |
Maple | Cubbli ? | Software Distribution | Commercial? |
Singularity | Turso | System package on a compute nodes | Container system |
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