Sequence evolution from molecules to genomes, fall 2009
Lecturer
Scope
4 cu.
Type and prerequisites
Advanced studies.
Some understanding on probabilistics and stochastics is useful.
This course is tailored for MBI (Bioinformatics Master Programme) but applicable to all other students as well.
MBI-students can take this course for major subject studies in bioinformatics or minor subject studies in biosciences.
Lectures
Period II, Tuesday 14-18 in computer class C128.
Home-exercises in student groups (~3-6 students / group), or alone.
Exams
There is no exam. Grading is based on home-exercises and an essay based on literature.
Content
Lecture slides |
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Assignments |
Datasets |
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If too difficult to find own data, use Dataset1 also for this assignment |
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Dataset1_in_FASTAformat..txt Dataset1_in_MEGAformat..txt Dataset2_in_FASTAformat..txt Dataset2_in_MEGAformat..txt |
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Collect from here: http://www.ncbi.nlm.nih.gov/genomes/FLU/SwineFlu.html |
http://www.ub.edu/dnasp, http://www.hiv.lanl.gov/content/sequence/findmodel/findmodel.html |
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Essay topics, literature pickings, |
Short presentations 15. Dec, |
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[^GENERAL_MOL_EVOL_ ] |
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Click here for further information: Student page
Registration
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