- 3D rendering and videos
- Cell counting
- CellProfiler notes
- Colocalization analysis
- Creating particle recognition training data for deep learning
- Custom tools
- Deconvolution
- Fiji plugins
- FRAP analysis
- Imaris License Selection
- Intensity analysis
- Lectures
- Lightsheet registration and fusion with Huygens
- MetaXpress
- Nano automation
- Neural morphology
- OpenPivGui
- Remote connection to HELMI 3D VM and 3D and HCA and LS Workstations
- Shading correction
- Spine counting and analysis
- Spots distance to surfaces
- Stitching
- Test
- Tracking moving objects
Workstations
Software/ Equipment |
| Leica application_suite X Core offline | ZEN lite | Sidebook viewer | NIS Elements viewer | Fiji 64x | ImagePro Analyzer | BioImageXD | InfranView | Corel PaintShopPro | Bitplane Imaris suite | MatLab 64x | Corel Video studio Lite | CellProfiler | CellProfiler | Microvolution Deconvolution | AutoQuant AutoDeblur | Huygens Suite |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2D workstation* | YES | YES | No | YES | YES | YES | YES | YES | YES | NO | NO | NO | NO | NO | NO | NO | NO | NO |
3D workstation | NO | YES1 | YES | NO | NO | YES | NO | NO | YES | YES | YES | YES | YES | YES | YES | YES | YES | YES |
HCA workstation | NO | YES | YES | YES2 | YES | YES | YES | YES | YES | YES | NO | NO | NO | YES | YES | NO | NO | NO |
LS workstation | NO | YES | YES | NO | NO | YES | NO | NO | YES | NO | YES | YES | NO | NO | NO | NO | NO | NO |
Helmi 3D workstation | NO | YES | YES | NO | NO | YES | NO | NO | YES | NO | YES | YES | NO | YES | YES | NO | NO | NO |
1) 3D Workstation has a full version of LAS X 4 including FLIM analysis
2) HCA Workstation has a full version of Slidebook.
*) 2D Workstation is inside LMU firewall because its operationg system is still a windows 7. It is meant to be used only for Cell-IQ Analyzer.